Molecular Clock Simulator

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Index

• Home
  • What is Clockgen
  • What you can't do with Clockgen
  • Download
• Quickstart
  • Installation
  • Running a Simple Simulation
  • Different Models of Evolution
• References
  • Introduction
    • Models of Evolution
    • Transmission Bottleneck
  • Command Line Arguments
  • Number of Generations
  • Mutations per Evolution - or clock
  • Nucleotides - the size of sequences
  • First Sequence
  • Host Immunity Factor
  • Description File Output
  • Evolutionary Model
  • Sequence Name

home · download · quickstart · references · index