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Gamgee |
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Gamgee is a high performance C++14 library for the major file formats in DNA
sequencing (SAM, BAM, CRAM, VCF, BCF, BED, FASTA and FASTQ) in high throughput
processes.
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Genome Analysis Toolkit (GATK) |
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The Genome Analysis Toolkit or GATK is a software package developed at the Broad
Institute to analyse next-generation resequencing data. The toolkit offers a wide
variety of tools, with a primary focus on variant discovery and genotyping as well
as strong emphasis on data quality assurance. Its robust architecture, powerful
processing engine and high-performance computing features make it capable of
taking on projects of any size.
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Legacy Software (historical)
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Alien Revolt |
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Version 1.2
Alien Revolt is the first location based RPG mobile game in the world.
The city is your battleground as you look for your enemies in your mobile phone.
The game was very successfuly released in the city of Rio de Janeiro with
extensive press coverage. See the website for a more detailed description
of this game.
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Clockgen |
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Version 1.0
Clockgen is a simulator program that generates random nucleotide sequences based on the theory of the existence of a molecular clock.
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Released 22 October, 2005
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Placar |
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Version 2.1
Automated scoreboard generator for online contests held on the UVA Online Judge
website. Follows the same scoring system as the ACM ICPC.
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LuaSSL |
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Version 0.81a
Secure Socket Layer Support for the LUA language.
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Released 21 November, 2003
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IupLua |
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Version 5.0
Multi-Platform Graphical User Interface for the LUA language.
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L.U.T. |
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Version 2.0
Lut is an interactive linear-by-parts function editor that is used to map
the density values present in 3D scanned volumes into the corresponding
density and color values used by direct volume renderers.
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Released 3 September, 2001
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The Adventures of Taina |
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Version 1.0
Based on a brazillian movie, Taina is a little indian who lives in permanent
adventure saving animals from hunters. She's a friend of nature and defender
of the Amazon forest. This game is a story based on the movie that happens
within the Amazon Rain Forest. It uses DirectX, some AI improved algorithms,
basic physics algorithms for moving and colliding. Works in a full multithreaded
environment. Some high quality 3D movies enhances the gameplay.
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Released 10 January, 2001
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BattleNet Ladder Calculator |
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Version 1.0
Calculates the probability of winning a ladder game in Blizzard's Battle.net.
Designed for Starcraft Ladder System, but also works for Warcraft and Brood War
Ladder.
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Released 20 February, 1999
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Gravity Force Simulator |
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Version 1.0
Simulates a whole configurable universe. Provides Zoom and orbit design.
It won the best Mathematics Software award in the 1998 "Introduction to Engineering"
class at Puc-Rio.
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